云南彝族人群19个常染色体STR基因座的遗传多态性
Genetic Polymorphism of 19 Autosomal STR Loci in Yunnan Yi Popolation
-
摘要: 目的 研究云南彝族215个健康无关个体19个常染色体STR基因座的遗传多态性, 计算群体遗传学参数, 建立云南彝族群体的遗传学基础数据, 为法医物证亲权鉴定和个体识别提供科学依据。方法 采用Chelex-100法提取样本DNA, Power PlexR21 System试剂盒进行扩增, ABI 3130XL自动遗传分析仪对PCR复合扩增产物进行分析, 用ABI的Gene Mapper v3.2软件进行STR基因分型分析, 用Modified-Powerstates软件进行法医学遗传学参数统计分析以及Hardy-Weinberg平衡检验。结果 共检出203个等位基因和666种基因型。除D1S1656、D5S818、D12S391外, 基因型分布均符合Hardy-Weinberg平衡规律 (P> 0.05) , 累积非父排除率 (CPE) 为0.999 999 907, 累积个人识别能力 (TDP) 为0.999 999 999 999 999 999 999 9。结论 19个常染色体基因座在云南彝族人群中具有较高的多态性和较好的个体识别能力, 能够为法医学个体识别和亲权鉴定提供科学的遗传学基础数据。Abstract: Objective To study the genetic polymorphisms of 19 autosomal STR loci in 215 healthy unrelated individuals of Yunnan Yi population, calculate population genetic parameters, and establish genetic basis data of Yunnan Yi population, and provide scientific basis for forensic material identification and individual identification.Methods The sample DNA was extracted by Chelex-100 method, amplified by Power Plex 21 System kit, and the PCR composite amplification product was analyzed by ABI 3130 XL automatic genetic analyzer. STR was performed with ABI Gene Mapper v3.2 software. Genotyping analysis, statistical analysis of forensic genetic parameters and Hardy-Weinberg equilibrium test using Modified-Powerstates software. Results A total of 203 alleles and 666 genotypes were detected. Except D1 S1656, D5 S818, D12 S391, the genotype distribution accorded with Hardy-Weinberg equilibrium law (P > 0.05) , the cumulative non-parent exclusion rate (CPE) was 0.999 999 907, and the cumulative personal recognition ability (TDP) was 0.999 999 999 999 999. 999 9999. Conclusion The 19 autosomal loci have high polymorphism and good individual recognition ability in Yunnan Yi population, and can provide scientific genetic basic data for forensic individual identification and paternity identification.
-
Key words:
- STR /
- Yunnan Yi population /
- Genetic polymorphism
-
[1] [1]WIEGANDP, KLEIBER M. Less is more-length reduction of STR amplicons using redesigned primers[J].International Journal of Legal Medicine, 2001, 114 (4-5) :285-287. [2] [2]WHITAKER J P, CLAYTON T M, URQUHART A J, et al. Short tandem repeat typing of bodies from a mass disaster:high success rate and characteristic amplification patterns in highly degraded samples[J].Biotechniques, 1995, 18 (4) :670-677. [3] 侯一平.STR自动分型[M].法医物证学第3版.北京:人民卫生出版社, 2013:127. [4] [4]BUTLER J M, COBLE M D, VALLONE P M. STRs vs.SNPs:thoughts on the future of forensic DNA testing[J].Forensic science, medicine and pathology, 2007, 3 (3) :200-205. [5] [5]TONG D, CHEN Y, OU X, et al. Polymorphism analysis and evaluation of 19 STR loci in the Han population of Southern China[J].Annals of Human Biology, 2013, 40 (2) :191-196. [6]刘开会, 李兆隆, 常彩琴.用Chelex100法及有机溶剂提取法联合提取DNA扩增STR基因座的比较研究[J].中国法医学杂志, 2001, 16 (2) :84-86. [7]赵方, 伍新尧, 蔡贵庆, et al. Modified-Powerstates软件在法医生物统计中应用[J].中国法医学杂志, 2003, 18 (5) :297-298. [8]侯一平.法医DNA分析的科学证据意义[J].中国法医学杂志, 2001, 16 (2) :118-126. [9] [9]THOMPSON G E A.Performingthe Exact Test of HardyWeinberg Proportion for Multiple Alleles[J].Biometrics, 1992, 48 (2) :361-372. [10] [10]LIU J, GUO L, QI R, et al. Allele frequencies of 19 autosomal STR loci in Manchu population of China with phylogenetic structure among worldwide populations[J].Gene, 2013, 529 (2) :282-287. [11]胡利平, 杜雷, 张秀峰, 等.云南汉族人群20个常染色体STR基因座遗传多态性[J].昆明医科大学学报, 2016, 37 (5) :17-21. [12] [12]GILL P, URQUHART A, MILLICAN E S, et al. A new method of STR interpretation using inferential logic-Development of a criminal intelligence database[J].International Journal of Legal Medicine, 1996, 109 (1) :14-22. [13]李忠杰, 吴虎, 吴海军, 等.苏州地区凉山籍彝族人群17个STR基因座遗传多态性[J].中国法医学杂志, 2015, 30 (4) :407-408. [14]陈丹, 白小刚, 李庆庆, 等.四川彝族人群15个常染色体STR基因座遗传多态性[J].中国法医学杂志, 2012, 27 (6) :480-481. [15]甘孜藏族自治州彝族人群18个STR基因座的遗传多态性研究[J].刑事技术, 2017, 42 (3) :191-194. [16]刘程静, 郑和成, 许建明, 等.云南地区彝族人群17个STR基因座的遗传多态性[J].中国法医学杂志, 2016, 31 (5) :493-494.
点击查看大图
计量
- 文章访问数: 1735
- HTML全文浏览量: 599
- PDF下载量: 69
- 被引次数: 0