Volume 45 Issue 8
Aug.  2024
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Hongxiu YANG, Zhongshan ZHU. Effect of HPRT1 Gene Expression on Overall Survival of Patients with Lung Adenocarcinoma[J]. Journal of Kunming Medical University, 2024, 45(8): 17-23. doi: 10.12259/j.issn.2095-610X.S20240803
Citation: Hongxiu YANG, Zhongshan ZHU. Effect of HPRT1 Gene Expression on Overall Survival of Patients with Lung Adenocarcinoma[J]. Journal of Kunming Medical University, 2024, 45(8): 17-23. doi: 10.12259/j.issn.2095-610X.S20240803

Effect of HPRT1 Gene Expression on Overall Survival of Patients with Lung Adenocarcinoma

doi: 10.12259/j.issn.2095-610X.S20240803
  • Received Date: 2024-04-02
    Available Online: 2024-07-06
  • Publish Date: 2024-08-05
  •   Objective   To explore the expression characteristics, prognostic effect, functional activation and immune infiltration of HPRT1 gene in lung adenocarcinoma.   Methods  The data of adenocarcinoma of the lung from TCGA and multiple GEO databases were collected and analyzed. The relationship between HPRT1 expression level and overall survival (OS) was compared and validated, and the functional enrichment of upregulated genes in the HPRT1 high-expression group was analyzed using ClusterProfiler. Furthermore, the infiltration levels of immune cells in lung adenocarcinoma were calculated using TIMER and CIBERSORT algorithms and compared between the HPRT1 high- and low-expression groups.   Results  The expression of HPRT1 was significantly upregulated in lung adenocarcinoma tissues, and TCGA dataset analysis showed the patients with high expression of HPRT1 gene had a poorer overall survival (OS) prognosis (P < 0.01). Validation through two GEO datasets also shows that high expression of the HPRT1 gene is associated with a worse OS prognosis (GSE13213, P < 0.01, GSE67639, P < 0.001). Differential analysis indicates that among patients with high expression, the expression levels of 683 genes are significantly upregulated, with these upregulated genes primarily enriched in signaling pathways related to cancer, such as p53 and the cell cycle. Analysis of immune cell infiltration levels using TIMER and CIBERSORT algorithms reveals that in the group with high expression and poor prognosis, the levels of B cells and CD4 T cells are lower (P < 0.05).  Conclusion   The higher the expression level of the HPRT1 gene, the significantly worse the overall survival of patients with lung adenocarcinoma, and in patients with high expression levels, the p53 signaling pathway is upregulated, and the infiltration level of B cells and CD4T cells is significantly decreased.
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  • [1]
    Tewari K S,Colombo N,Monk B J,et al. Pembrolizumab or placebo plus chemotherapy with or without bevacizumab for persistent,recurrent,or metastatic cervical cancer: Subgroup analyses from the KEYNOTE-826 randomized clinical trial[J]. JAMA Oncol,2024,10(2):185-192. doi: 10.1001/jamaoncol.2023.5410
    [2]
    Ma W,Zeng J,Montoya D J,et al. Labyrinthin expression is associated with poor prognosis in patients with non-small cell lung cancer[J]. Cancers (Basel),2023,15(3):924. doi: 10.3390/cancers15030924
    [3]
    Wang X S,Bai Y F,Verma V,et al. Randomized trial of first-line tyrosine kinase inhibitor with or without radiotherapy for synchronous oligometastatic EGFR-mutated non-small cell lung cancer[J]. J Natl Cancer Inst,2023,115(6):742-748. doi: 10.1093/jnci/djac015
    [4]
    Chen F,Byrd A L,Liu J,et al. Polycomb deficiency drives a FOXP2-high aggressive state targetable by epigenetic inhibitors[J]. Nat Commun,2023,14(1):336. doi: 10.1038/s41467-023-35784-x
    [5]
    John P,Sudandiradoss C. A comprehensive integrated gene network construction to explore the essential role of Notch 1 in lung adenocarcinoma (LUAD)[J]. J Biomol Struct Dyn,2024,1-13.
    [6]
    Xu H,Hu Y,Peng X,et al. Prediction of prognostic and immune therapy response in lung adenocarcinoma based on MHC-I-related genes[J]. Immunopharmacol Immunotoxicol,2024,46(1):93-106. doi: 10.1080/08923973.2023.2261146
    [7]
    Gurioli G,Conteduca V,Brighi N,et al. Circulating tumor cell gene expression and plasma AR gene copy number as biomarkers for castration-resistant prostate cancer patients treated with cabazitaxel[J]. BMC Med,2022,20(1):48. doi: 10.1186/s12916-022-02244-0
    [8]
    Miao J,Kang L,Lan T,et al. Identification of optimal reference genes in golden Syrian hamster with ethanol- and palmitoleic acid-induced acute pancreatitis using quantitative real-time polymerase chain reaction[J]. Animal Model Exp Med,2023,6(6):609-618. doi: 10.1002/ame2.12321
    [9]
    Chen L,He X,Yi S,et al. Six glycolysis-related genes as prognostic risk markers can predict the prognosis of patients with head and neck squamous cell carcinoma[J]. Biomed Res Int,2021,2021:8824195.
    [10]
    Gurioli G, Conteduca V, Brighi N, et al. Circulating tumor cell gene expression and plasma AR gene copy number as biomarkers for castration-resistant prostate cancer patients treated with cabazitaxel[J]. BMC Med,2022,20(1):48.
    [11]
    Goldman M J,Craft B,Hastie M,et al. Visualizing and interpreting cancer genomics data via the Xena platform[J]. Nat Biotechnol,2020,38(6):675-678. doi: 10.1038/s41587-020-0546-8
    [12]
    Tomida S,Takeuchi T,Shimada Y,et al. Relapse-related molecular signature in lung adenocarcinomas identifies patients with dismal prognosis[J]. J Clin Oncol,2009,27(17):2793-2799. doi: 10.1200/JCO.2008.19.7053
    [13]
    Gentles A J,Bratman S V,Diehn M,et al. Integrating tumor and stromal gene expression signatures with clinical indices for survival stratification of early-stage non-small cell lung cancer[J]. J Natl Cancer Inst,2015,107(10):djv211. doi: 10.1093/jnci/djv211
    [14]
    Uhlen M,Zhang C,Lee S,et al. A pathology atlas of the human cancer transcriptome[J]. Science,2017,357(6352):eaan2507. doi: 10.1126/science.aan2507
    [15]
    Yan Z,Wang Q,Lu Z,et al. OSluca: An interactive web server to evaluate prognostic biomarkers for lung cancer[J]. Front Genet,2020,11:420. doi: 10.3389/fgene.2020.00420
    [16]
    Yu G,Wang L G,Han Y,et al. clusterProfiler: An R package for comparing biological themes among gene clusters[J]. OMICS,2012,16(5):284-287. doi: 10.1089/omi.2011.0118
    [17]
    Wu M,Jiang L. Hydroxysteroid 17-beta dehydrogenase 6 is a prognostic biomarker and correlates with immune infiltrates in hepatocellular carcinoma[J]. Dig Dis Sci,2022,67(1):146-158. doi: 10.1007/s10620-021-06832-7
    [18]
    Chen B,Khodadoust M S,Liu C L,et al. Profiling tumor infiltrating immune cells with CIBERSORT[J]. Methods Mol Biol,2018,1711:243-259.
    [19]
    Mavridis K,Stravodimos K,Scorilas A. Quantified KLK15 gene expression levels discriminate prostate cancer from benign tumors and constitute a novel independent predictor of disease progression[J]. Prostate,2013,73(11):1191-201. doi: 10.1002/pros.22667
    [20]
    朱中山,杨洲,江承川,等. 肺腺癌患者PLA2G1B表达情况与预后的相关性[J]. 昆明医科大学学报,2022,43(9):70-76.
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