Du Fei , Li Rong , He Rui , Zeng Shui Qin , Duan Kai Wen , Li Cheng Wen . Establishment of Detection Methodology of C.albicans by Real-time PCR[J]. Journal of Kunming Medical University, 2017, 38(07): 55-59.
Citation: Du Fei , Li Rong , He Rui , Zeng Shui Qin , Duan Kai Wen , Li Cheng Wen . Establishment of Detection Methodology of C.albicans by Real-time PCR[J]. Journal of Kunming Medical University, 2017, 38(07): 55-59.

Establishment of Detection Methodology of C.albicans by Real-time PCR

Funds:

基金: 国家自然科学基金资助项目 (30860315, 81160135); 云南省科技厅-昆明医科大学联合专项基金资助项目 (2015FA009);

  • Received Date: 2017-02-21
  • Objective To use TaqMan MGB probe technology to establish a detection methodology of Candida albicans (C.albicans) by real-time fluorescence quantitative PCR (RQ-PCR) and to provide a quick method for the detection of candida infection in clinical settings. Methods D1/D2 region of candida species which is a highly conserved sequence gene was selected as amplification target sequence and specific primers and probes for C.albicans were synthesized. The DNA of standard strains of C.albicans was extracted and rebuilt plasmid containing the target gene fragment was constructed. The DNA was amplified as a standard to establish the standard curve of C.albicans and methodological evaluation was conducted to identify the linear range, repeatability, sensitivity, specificity and so on. Results After sequencing the recombinant cloning vector, the sequence of the fragment inserted was consistent with the expected sequence, with the similarity of 100%. C.albicans standard curve Y =-3.824 x +41.36, R2= 0.990, which was in good shape and illustrated the detection method of C.albicans by real-time PCR had successfully established. Conclusion The detection method of C.albicans by real-time PCR has better sensitivity and specificity.
  • loading
  • [1]
    [1]HEBECKER B, NAGLIK J R, HUBE B, et al.Pathogenicity mechanisms and host response during oral Candida albicans infections[J].Expert Rev Anti Infect Ther, 2014, 12 (7) :867-879.
    [2]廖万青.侵袭性真菌感染的实验室诊断[J].检验医学, 2010, 7 (25) :503-506.
    [3]廖万清, 陈敏.侵袭性真菌病的诊断:现状与展望[J].菌物学报, 2011, 30 (1) :5-11.
    [4]
    [4]KLINGSPOR L.Aspergillus PCR:formidable challenges and progress[J].Med Mycol, 2009, 47 (Suppl 1) :S241-S247.
    [5]
    [5]KHOT PD, FREDRICKS DN.PCR-based diagnosis of human fungal infections[J].Expert Rev Anti Infect Ther, 2009, 7 (10) :1201-1221.
    [6]
    [6]KHOT P D, KODL, HACKMANRC, et al.Development andoptimization of quantitative PCR for the diagnosis of invasive aspergillosis With bronchoalveolar lavage fluid[J].BMC Infect Dis, 2008, 29 (8) :73.
    [7]
    [7]NABILI M, ASHRAFI M, JANBABAIE G, et al.Quantification and optimization of Candida albicans DNA in blood samples using Real-Time PCR[J].Rep Biochem Mol Biol, 2013, 2 (1) :42-47.
    [8]郭强, 王英, 侯强, 张丽娟, 等.实时荧光定量PCR检测白念珠菌的可靠性评价[J].中国麻风皮肤病杂志, 2009, 6 (25) :410-412.
    [9]
    [9]ANDREW M B, CHRISTOPHER J L, SARAH J M, et al.Molecular identification of pathogenic fungi[J].J Antimicrob Chemo ther, 2008, 61 (Suppl 1) :7-12.
    [10]
    [10]FERRIS R A, DERN K, VEIR J K, et al.Development of a broad-range quantitative polymerase chain reaction assay to detect and identify fungal DNA in equine endometrial samples[J].Am J Vet Res, 2013, 74 (1) :161-165.
    [11]张丽, 殷泽刚, 代茂林.口腔念珠菌病患者口内菌株分型及药敏观察[J].现代预防医学, 2015, 42 (14) :2615-2616, 2641.
    [12]中华医学会“念珠菌病诊治策略高峰论坛”专家组.念珠菌病诊断与治疗[J].专家共识, 2011, 11 (2) :81-95.
    [13]赵正娟, 田伟, 赵敬军.DNA序列分析用于常规致病真菌鉴定和分型[J].中国真菌学杂志, 2011, 6 (5) :316-320.
    [14]
    [14]YANAN ZHAO, RUTA PETRAITIENE, THOMAS J, et al.A real-time PCR assay for rapid detection and quantification of exserohilum rostratum, a causative pathogen of fungal meningitis associated with injection of contaminated methylprednisolone[J].Clinical Microbiology, 2013, 51 (3) :1034-1036.
    [15]李真, 左绪磊.侵袭性念珠菌病的实验室诊断研究进展[J].检验医学, 2007, 22 (1) :102-104.
    [16]丁宁, 闫志敏, 华红.实时荧光定量PCR法检测原发性综合征口腔真菌菌群[J].北京大学学报, 2013, 1 (45) :17-21.
    [17]
    [17]CARA MARTIN, DAVID ROBERTS, MARJO, et al.Development of a PCR-nased line probe sssay for identification of gungal pathogens[J].Clinical Microbiology, 2000, 38 (10) :3735-3742.
    [18]
    [18]LAHEIJ A M, DE SOET J J, VON DEM BORNE P A, et al.Oral bacteria and yeasts in relationship to oral ulcerations in hematopoietic stem cell transplant recipients[J].Support Care Cancer, 2012, 20 (12) :3231-3240.
    [19]
    [19]BRINKMAN NE, HAUGLAND RA, WYMER LJ, et Al.Evaluation of a rapid, quantitative real-time PCR method for enumeration of pathogenic Candida cells in water[J].Appl Environ Microbiol, 2003, 69 (3) :1775-1782.
    [20]
    [20]FREDRICKS DN, SMITH C, MEIER A.Comparison of six DNA extraction methods for recovery of fungal DNA as assessed by quantitative PCR[J].Clin Microbiol, 2005, 43 (10) :5122-5128.
  • Relative Articles

    [1] Hong LI. Quantitative Analysis of Real-time Ultrasound Elastography in Elderly Patients with Advanced Malignant Obstructive Jaundice in Assessing the Prognosis of PTCD. Journal of Kunming Medical University, 2023, 44(2): 150-155.  doi: 10.12259/j.issn.2095-610X.S20230206
    [2] Hong LI. Quantitative Analysis of Real-time Ultrasound Elastography in Elderly Patients with Advanced Malignant Obstructive Jaundice and the Assessment of Prognostic Value of PTCD. Journal of Kunming Medical University, 2023, 44(1): 122-127.  doi: 10.12259/j.issn.2095-610X.S20230123
    [3] Li Chun Mei . Comparison of Three Identification Tests of Vulvovaginal Candidiasis' Candida Strains. Journal of Kunming Medical University,
    [4] Sun Yue , Wei Jia , Lu Yong Ping , Wang Jin , Zou Yu , Wang Yu Xue , Yang Mi . Quantitative Analysis on Staging of Chronic Viral Hepatitis B and Hepatic Fibrosis by Real-time Shear Wave Elastography. Journal of Kunming Medical University, 2016, 37(11): 55-59.
    [5] Li Zheng Jin . Application of 13 High-risk HPV infection Test Combined with Thinprep Cytologic Test on Screening Cervical Carcinoma in Dali Region, Yunnan Province. Journal of Kunming Medical University,
    [6] Du Juan . . Journal of Kunming Medical University,
    [7] Chen Xing Yin . . Journal of Kunming Medical University,
    [8] Shi Ming Tian . . Journal of Kunming Medical University,
    [9] Zhao Dong Yan . . Journal of Kunming Medical University,
    [10] Chen Xi . . Journal of Kunming Medical University,
    [11] Zhu Ya Juan . . Journal of Kunming Medical University,
    [12] Gao Jing . . Journal of Kunming Medical University,
    [13] Zhou Ting Ting . . Journal of Kunming Medical University,
    [14] Pu Dong . . Journal of Kunming Medical University,
    [15] Wu Yun Ding . . Journal of Kunming Medical University,
    [16] He Qiu . . Journal of Kunming Medical University,
    [17] . The Variation of Quantitative Lung Data on Vibration Response Imaging System. Journal of Kunming Medical University,
    [18] . Polymerase Chain Reaction- Restriction Fragment Length Polymorphism in the Detection of Leu262Val Polymorphism of PARL Gene. Journal of Kunming Medical University,
    [19] Li Dong Mei . . Journal of Kunming Medical University,
    [20] Chen Ya Juan . . Journal of Kunming Medical University,
  • 加载中

Catalog

    通讯作者: 陈斌, bchen63@163.com
    • 1. 

      沈阳化工大学材料科学与工程学院 沈阳 110142

    1. 本站搜索
    2. 百度学术搜索
    3. 万方数据库搜索
    4. CNKI搜索

    Article Metrics

    Article views (1620) PDF downloads(140) Cited by()
    Proportional views
    Related

    /

    DownLoad:  Full-Size Img  PowerPoint
    Return
    Return