Genetic Polymorphism Analysis of 27 Y-STR Loci in the Hui Population from Weishan, Yunnan Province

Lei Qiang; Xiao Yue; Zhang Wei; Di Dian; Cheng Bao Wen; Zeng Fa Ming

Article Contents

Article Navigation > Journal of Kunming Medical University > 2017 > 38(08): 25-29

Lei Qiang , Xiao Yue , Zhang Wei , Di Dian , Cheng Bao Wen , Zeng Fa Ming . Genetic Polymorphism Analysis of 27 Y-STR Loci in the Hui Population from Weishan, Yunnan Province[J]. Journal of Kunming Medical University, 2017, 38(08): 25-29.

Citation:

Lei Qiang , Xiao Yue , Zhang Wei , Di Dian , Cheng Bao Wen , Zeng Fa Ming . Genetic Polymorphism Analysis of 27 Y-STR Loci in the Hui Population from Weishan, Yunnan Province[J]. Journal of Kunming Medical University, 2017, 38(08): 25-29.

Citation:

PDF( 242 KB)

Genetic Polymorphism Analysis of 27 Y-STR Loci in the Hui Population from Weishan, Yunnan Province

Funds:

基金：国家自然科学基金资助项目 (81660311);

Received Date: 2017-04-12

Abstract

Abstract

Objective To investigate the genetic polymorphisms of 27 Y-STR loci in Hui population from Weishan, Yunnan Province, and obtain the genetic basic data of Hui population, to provide data support for forensic identification, and to promote the establishment of Y-STR database. Methods Blood samples of 171 unrelated male individuals were collected.DNA was amplified by using YfilerRPlus system and genotyped by ABI3500 Genetic Analyzer. The forensic parameters were calculated.Results In the 171 unrelated male individuals, the allele frequency was 0.00580.7207, the gene diversity (GD) was 0.43140.9408. 169 different haplotypes were observed once, 1 haplotype occurred twice.The haplotype diversity (HD) was0.99986 and the discriminative capacity (DC) was 0.994152.Conclusion The 27 Y-STR loci are highly polymorphic in Hui population from Weishan, Yunnan Province, and could be provided the basis for forensic identification and the establishment of Y-STR database.
- Y-STR,
- Genetic polymorphism,
- Weishan Hui population

FullText(HTML)

References(23)

References

[1]唐维, 吴道来, 陈立方, 等.云南白族15个常染色体STR基因座的遗传多态性[J].昆明医科大学学报, 2016, 37 (5) :128-131.
[2]胡利平, 杜雷, 张秀峰, 等.云南汉族人群20个常染色体STR基因座的遗传多态性[J].昆明医科大学学报, 2016, 37 (5) :17-21.
[3]马立宇, 胡利平, 聂爱婷, 等.云南白族人群13个快速突变 (RM) Y-STR基因座多态性研究[J].昆明医科大学学报, 2015, 36 (7) :170-177.
[4]	[4]LESSIG R, EDELMANN J, KLEEMANN W J, et al.Population data of Y-chromosomal STRs in Russian males of the Primorye region population[J].Forensic Sci Int, 2006, 159 (1) :71-76.
[5]	[5]PURPS J, GEPPERT M, NAGY M, et al.Validation of a combined autosomal/Y-chromosomal STR approach for analyzing typical biological stains in sexual-assault cases[J].Forensic Science International Genetics, 2015, 19 (11) :238-242.
[6]	[6]MARTINEZ-CADENAS C, BLANCO-VEREA A, HERNANDO B, et al.The relationship between surname frequency and Y chromosome variation in Spain[J].Eur J Hum Genet, 2016, 24 (1) :120-128.
[7]	[7]KAYSER M.Forensic use of Y-chromosome DNA:A general overview[J].Human Genetics, 2017, 136 (5) :621-635.
[8]	[8]COBLE M D, HILL C R, BUTLER J M.Haplotype data for 23 Y-chromosome markers in four U.S.population groups[J].Forensic Science International Genetics, 2013, 7 (3) :e66-e68.
[9]	[9]NEI M, TAJIMA F, TATENO Y.Accuracy of estimated phylogenetic trees from molecular data.II.Gene frequency data[J].Journal of Molecular Evolution, 1983, 19 (2) :153-170.
[10]	[10]TAMURA K, DUDLEY J, NEI M, et al.MEGA4:Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0[J].Molecular Biology and Evolution, 2007, 24 (8) :1596-1599.
[11]	[11]ZHANG X, GU T, YAO J, et al.Genetic analysis of 24Y-STR loci in the Miao ethnic minority from Yunnan Province, southwestern China[J].Forensic Science International Genetics, 2017, 28 (5) :e30-e32.
[12]黄玉静.云南佤族、白族、傣族Y-SNP与Y-STR多态性研究与法医学意义[D].昆明:昆明医科大学硕士论文2011.
[13]	[13]HAMMER M F.A recent insertion of an alu element on the Y chromosome is a useful marker for human population studies[J].Molecular Biology and Evolution, 1994, 11 (5) :749-761.
[14]	[14]ALTHEIDE T K, HAMMER M F.Evidence for a possible Asian origin of YAP+Y chromosomes[J].American Journal of Human Genetics, 1997, 61 (2) :462-466.
[15]	[15]MITCHELL R J, HAMMER M F.Human evolution and the Y chromosome[J].Curr Opin Genet Dev, 1996, 6 (6) :737-742.
[16]	[16]HAMMER SPURDLE A B, KARAFET T, BONNER M R, et al.The geographic distribution of human Y chromosome variation[J].Genetics, 1997, 145 (3) :787-805.
[17]	[17]CERUTTI N, MARIN A, Di GAETANO C, et al.Population data for Y-chromosome STR haplotypes from Piedmont (Italy) [J].Forensic Sci Int, 2006, 158 (2-3) :238-243.
[18]	[18]FRANK W E, RALPH H C, TAHIR M A.Y chromosome STR haplotypes and allele frequencies in a southern Indian male population[J].J Forensic Sci, 2008, 53 (1) :248--251.
[19]葛建业, 严江伟, 谢群, 等.中国Y-STR数据库建设相关问题探讨[J].法医学杂志, 2013, 29 (3) :212-215.
[20]	[20]KOYAMA H, IWASA M, TSUCHIMOCHI T, et al.Utility of Y-STR haplotype and mt DNA sequence in personal identification of human remains[J].The American Journal of Forensic Medicine and Pathology, 2002, 23 (2) :181-185.
[21]	[21]HONDA K, ROEWER L, DE KNIJFF P.Male DNA typing from 25-year-old vaginal swabs using Y chromosomal STR polymorphisms in a retrial request case[J].Journal of Forensic Sciences, 1999, 44 (4) :868-872.
[22]	[22]KAYSER M, CAGLIA A, CORACH D, et al.Evaluation of Y-chromosomal STRs:a multicenter study[J].International Journal of Legal Medicine, 1997, 110 (3) :125-33, 41-49.
[23]	[23]LIND J M, HUTCHESON-DILKS H B, WILLIAMS S M, et al.Elevated male European and female African contributions to the genomes of African American individuals[J].Human Genetics, 2007, 120 (5) :713-722.

Relative Articles(20)

Relative Articles

[1]	Yan SHI, Jian JIANG, Chong CHEN, Jingjing ZHANG, Li JIA, Zhixiao GAO, Huifen LI, Jiangwei YAN, He REN. Polymorphism Investigation of 23 Autosome STR Loci in the Microreader^TM 23HS Plex ID System in Han Population in Northern China. Journal of Kunming Medical University, 2024, 45(7): 154-159. doi: 10.12259/j.issn.2095-610X.S20240723
[2]	Guangxing LI, Yunmei ZHANG, Chengjing LIU, Weitao WANG, Kai ZHAO. Polymorphism of 19 Autosomal STR Loci in Achang and De’ang Populations. Journal of Kunming Medical University, 2023, 44(8): 8-13. doi: 10.12259/j.issn.2095-610X.S20230809
[3]	Kai ZHAO, Yunmei ZHANG, Weitao WANG, Guangxing LI. Genetic Polymorphisms of 17 Autosomal STR Loci in the Jino Population of Yunnan. Journal of Kunming Medical University, 2023, 44(6): 126-130. doi: 10.12259/j.issn.2095-610X.S20230627
[4]	Chongchong XU, Shang WANG, Wei WEI, Ning ZHANG, Kuan LI, Xinqing LIAN, Shixu WANG, Xuemei ZHOU, Xiaoxiao LU, Shurong ZHONG. Genetic polymorphisms of 20 Autosomal STR loci in Miao Population from Wenshan and Honghe Regions， Yunnan Province. Journal of Kunming Medical University, 2022, 43(10): 153-162. doi: 10.12259/j.issn.2095-610X.S20221020
[5]	Wei WEI, Shouxun ZHANG, Chongchong XU, Yanling JIANG, Yi LI, Shuo YANG, Jianli HAN, Kuan LI, Fei ZHAO, Xiaopei YANG, Neng ZHANG, Xiaoxiao LU, Shurong ZHONG. Population Genetic Analysis of 18 Autosomal STR Loci in Minjia Branch of Bai Nationality in Yunnan Province, Southwest China. Journal of Kunming Medical University, 2022, 43(5): 33-43. doi: 10.12259/j.issn.2095-610X.S20220510
[6]	Chen Can Kun , Chen Zhi Bin , Yang Jing Yi , Yang Yu , Fan Zhi Xiang , Zhang Yan Jie , Zhang Lu , Long Li . . Journal of Kunming Medical University, 2019, 40(12): 39-43.
[7]	Yang Shuo , Jiang Yan Ling , Fang Bao Xiong , Ji Ai Cen , Zhang Shou Xun , Zhang Xiu Feng , Zhang Nin , Zhao Fei , Zhong Shu Rong . Genetic Polymorphism of 19 Autosomal STR Loci in Yunnan Yi Popolation. Journal of Kunming Medical University, 2019, 40(03): 120-125.
[8]	Zhang Nin , Jiang Yan Ling , Fang Bao Xiong , Ji Ai Cen , Zhang Xiu Feng , Zhang Shou Xun , Yang Shuo , Zhao Fei , Zhong Shu Rong . . Journal of Kunming Medical University, 2019, 40(02): 30-35.
[9]	Yang Shuo , Lu Xiao Xiao , Zhang Shou Xun , Xia Sheng , Zhang Nin , Zhang Xiu Feng , Li Jia Jue , Hu Li Ping , Zhong Shu Rong . . Journal of Kunming Medical University, 2019, 40(09): 1-11.
[10]	Pang Jing Bo , Li Jia Jue , Liu Can Gang , Liu Hao Dong , Wu Bo , Nie Sheng Jie , Hu Li Ping . . Journal of Kunming Medical University, 2019, 40(06): 42-47.
[11]	Luo Lan . The Correlation of Polymorphisms of AT1R A1166C and AGT M235T Genes and Blood Biochemical Indicators with Essential Hypertension in the Male of Yi Nationality in Yunnan Province. Journal of Kunming Medical University,
[12]	Tang Wei . Polymorphism Investigation on 15 STR Loci of Yunnan Bai Population. Journal of Kunming Medical University,
[13]	Hu Li Ping . Genetic Polymorphism of 20 Autosomal STR Loci in Yunnan Han Popolation. Journal of Kunming Medical University,
[14]	Li Ying Fu . . Journal of Kunming Medical University,
[15]	Ma Li Yu . . Journal of Kunming Medical University,
[16]	Li Ying Fu . . Journal of Kunming Medical University,
[17]	Yu Jian Hua . . Journal of Kunming Medical University,
[18]	Long Li . . Journal of Kunming Medical University, 2012, 33(11): 1-1.
[19]	Yang Yu Ling . . Journal of Kunming Medical University,
[20]	Liu De Hua . . Journal of Kunming Medical University,